Clean Code

Learn Clean Code, YouTube PHP: The Right Way, link Udemy courses Design Pattern, Doc, Pattern Libraries Postman for testing API, YouTube Essential Scrum, Chapter [5, 7, 17, 18, 19] Terraform Ansible IBMCloud TechWorld What is IaCode DevOps Crash Course, youtube Todo - Project repo, doc Done - Project Todo - Github Done - Github Get fuw-cicd-#546 running in my computer, review doc at here Finished the workflow video, but when I clicked View Dataset after Move files to public ftp, the page still did not contain any uploaded data Finish Changes to test infrastructure #643 Finished unit test, functional test AOB Finished the draft and send email to BGI legal dept, doc Waiting Chris reply Found out that psql port 5432 should have been opened by request purposely #636 Reference ...

Learn Clean Code, YouTube PHP: The Right Way, link Udemy courses Design Pattern, Doc, Pattern Libraries Postman for testing API, YouTube Essential Scrum, Chapter [5, 7, 17, 18, 19] Terraform Ansible IBMCloud TechWorld What is IaCode DevOps Crash Course, youtube Todo - Project repo, doc Time to pick up taverna again, it could produce excel with all the columns except the publon review link DOI column Peter will help on the getPublonReviewLinkDoi Done - Project Todo - Github Done - Github Get fuw-cicd-#546 running in my computer, review doc at here Ran unit test, functional test, acceptance test and coverage test AOB Drafted email to BGI legal dept, doc Finished 2 rounds of TPM interviews Reference ...

Learn Clean Code, YouTube PHP: The Right Way, link Udemy courses Design Pattern, Doc, Pattern Libraries Postman for testing API, YouTube Essential Scrum, Chapter [5, 7, 17, 18, 19] Terraform Ansible IBMCloud TechWorld What is IaCode DevOps Crash Course, youtube Todo - Project repo, requirement doc, progress Time to pick up taverna again, it could produce excel with all the columns except the publon review link DOI column Done - Project Todo - Github Done - Github Follow up Add-citation-box-#521 Bring the dropdown item to the front and pass the behat test Update patterned library Review fuw-cicd-#546, review doc at here Exception 'yii\db\Exception' with message 'SQLSTATE[08006] [7] could not translate host name "dockerhost" to address: Name or service not known' AOB Follow up NAS issues Reference ...

Learn Clean Code, YouTube PHP: The Right Way, link Udemy courses Design Pattern, Doc, Pattern Libraries Postman for testing API, YouTube Essential Scrum, Chapter [5, 7, 17, 18, 19] Terraform Ansible IBMCloud TechWorld What is IaCode DevOps Crash Course, youtube Todo - Project repo, doc Study actionMint in /protected/controller/AdminDatasetController.php /** * post metadata, mint a new DOI * */ public function actionMint() { $result['status'] = false; $status_array = array('Submitted', 'UserStartedIncomplete', 'Curation'); $mds_metadata_url="https://mds.datacite.org/metadata"; $mds_doi_url="https://mds.datacite.org/doi"; $mds_username = Yii::app()->params['mds_username']; $mds_password = Yii::app()->params['mds_password']; $mds_prefix = Yii::app()->params['mds_prefix']; if (isset($_POST['doi'])) { $doi = $_POST['doi']; if (stristr($doi, "/")) { $temp = explode("/", $doi); $doi = $temp[1]; } $doi = trim($doi); $dataset = Dataset::model()->find("identifier=?", array($doi)); if ($dataset && ! in_array($dataset->upload_status, $status_array)) { $xml_data = $dataset->toXML(); $ch= curl_init(); curl_setopt($ch, CURLOPT_URL, $mds_metadata_url); curl_setopt($ch, CURLOPT_POST, 1); curl_setopt($ch, CURLOPT_RETURNTRANSFER, 1); curl_setopt($ch, CURLOPT_POSTFIELDS, "$xml_data"); curl_setopt($ch, CURLOPT_HTTPHEADER, array('Content-Type:application/xml;charset=UTF-8')); curl_setopt($ch, CURLOPT_USERPWD, $mds_username . ":" . $mds_password); $curl_response = curl_exec($ch); $result['md_curl_response'] = $curl_response; $info1 = curl_getinfo($ch); $result['md_curl_status'] = $info1['http_code']; curl_close($ch) ; } if ($dataset && $result['md_curl_status'] == 201) { $doi_data = "doi=".$mds_prefix."/".$doi."\n"."url=http://gigadb.org/dataset/".$dataset->identifier ; $result['doi_data'] = $doi_data; $ch2= curl_init(); curl_setopt($ch2, CURLOPT_URL, $mds_doi_url); curl_setopt($ch2, CURLOPT_POST, 1); curl_setopt($ch2, CURLOPT_RETURNTRANSFER, 1); curl_setopt($ch2, CURLOPT_POSTFIELDS, $doi_data); curl_setopt($ch2, CURLOPT_HTTPHEADER, array('Content-Type:application/xml;charset=UTF-8')); curl_setopt($ch2, CURLOPT_USERPWD, $mds_username . ":" . $mds_password); $curl_response = curl_exec($ch2); $result['doi_curl_response'] = $curl_response; $info2 = curl_getinfo($ch2); $result['doi_curl_status'] = $info2['http_code']; curl_close($ch2) ; } if (isset($result['doi_curl_status']) && $result['doi_curl_status'] == 201) { $result['status'] = true; } } echo json_encode($result); Yii::app()->end(); } Done - Project Todo - Github Follow up Add-citation-box-#521 Update <a></a> elements to <ul><li></li></ul> structure Tried to use bootstrap dropdown button Review fuw-cicd-#546, review doc at here Done - Github AOB Follow up server issue 192.168.208.43, 192.168.208.44, 192.168.208.74 have been returned back to BGI IT team Still owning 192.168.208.73 and it is running, because it is hosting www.gigadb.org Follow up NAS issue 杨杰威(Jed Yang) is helping us to gather compliance and regulation information from 曾文君(Ken Zeng), and his supervisor, Alex, would like to know why we would want to have a NAS 郑康和(Kanghe Zheng), the one who suggests us to place the NAS in BGI Tai Po and later the 3rd party Data centre in HK, wants to meet with us together with 周飞羽(Feiyu Zhou) and 田晶(Jing Tian) on 14/5 at 1400 Reference ...

Learn Clean Code, YouTube PHP: The Right Way, link Udemy courses Design Pattern, Doc, Pattern Libraries Postman for testing API, YouTube Essential Scrum, Chapter [5, 7, 17, 18, 19] Terraform Ansible IBMCloud DevOps Crash Course, youtube Todo - Project repo, doc Local Taverna Study DataCite MDS API Guide Get DOI for publon review link Done - Project Found actionMint in /protected/controller/AdminDatasetController.php /** * post metadata, mint a new DOI * */ public function actionMint() { $result['status'] = false; $status_array = array('Submitted', 'UserStartedIncomplete', 'Curation'); $mds_metadata_url="https://mds.datacite.org/metadata"; $mds_doi_url="https://mds.datacite.org/doi"; $mds_username = Yii::app()->params['mds_username']; $mds_password = Yii::app()->params['mds_password']; $mds_prefix = Yii::app()->params['mds_prefix']; if (isset($_POST['doi'])) { $doi = $_POST['doi']; if (stristr($doi, "/")) { $temp = explode("/", $doi); $doi = $temp[1]; } $doi = trim($doi); $dataset = Dataset::model()->find("identifier=?", array($doi)); if ($dataset && ! in_array($dataset->upload_status, $status_array)) { $xml_data = $dataset->toXML(); $ch= curl_init(); curl_setopt($ch, CURLOPT_URL, $mds_metadata_url); curl_setopt($ch, CURLOPT_POST, 1); curl_setopt($ch, CURLOPT_RETURNTRANSFER, 1); curl_setopt($ch, CURLOPT_POSTFIELDS, "$xml_data"); curl_setopt($ch, CURLOPT_HTTPHEADER, array('Content-Type:application/xml;charset=UTF-8')); curl_setopt($ch, CURLOPT_USERPWD, $mds_username . ":" . $mds_password); $curl_response = curl_exec($ch); $result['md_curl_response'] = $curl_response; $info1 = curl_getinfo($ch); $result['md_curl_status'] = $info1['http_code']; curl_close($ch) ; } if ($dataset && $result['md_curl_status'] == 201) { $doi_data = "doi=".$mds_prefix."/".$doi."\n"."url=http://gigadb.org/dataset/".$dataset->identifier ; $result['doi_data'] = $doi_data; $ch2= curl_init(); curl_setopt($ch2, CURLOPT_URL, $mds_doi_url); curl_setopt($ch2, CURLOPT_POST, 1); curl_setopt($ch2, CURLOPT_RETURNTRANSFER, 1); curl_setopt($ch2, CURLOPT_POSTFIELDS, $doi_data); curl_setopt($ch2, CURLOPT_HTTPHEADER, array('Content-Type:application/xml;charset=UTF-8')); curl_setopt($ch2, CURLOPT_USERPWD, $mds_username . ":" . $mds_password); $curl_response = curl_exec($ch2); $result['doi_curl_response'] = $curl_response; $info2 = curl_getinfo($ch2); $result['doi_curl_status'] = $info2['http_code']; curl_close($ch2) ; } if (isset($result['doi_curl_status']) && $result['doi_curl_status'] == 201) { $result['status'] = true; } } echo json_encode($result); Yii::app()->end(); } Todo - Github Learn Terraform and Ansible Follow up PR comments Study #422 Done - Github Rebase Add-citation-box-#521 with upstream/develop Start to review fuw-cicd-#546, review doc at here Terraform, IBMCloud fcc TechWord Provision EC2 on AWS, github Learn Terraform in 10 minutes Using Terraform to create EC2 instance Infrastructure as code Infrastructure as Code with Terraform AOB Follow up server issues Create a ITSM ticket for it Reference ...